Search results for "Infectious Disease Epidemiology"

showing 10 items of 12 documents

Environmental change and disease dynamics: effects of intensive forest management on Puumala hantavirus infection in boreal bank vole populations.

2012

Intensive management of Fennoscandian forests has led to a mosaic of woodlands in different stages of maturity. The main rodent host of the zoonotic Puumala hantavirus (PUUV) is the bank vole (Myodes glareolus), a species that can be found in all woodlands and especially mature forests. We investigated the influence of forest age structure on PUUV infection dynamics in bank voles. Over four years, we trapped small mammals twice a year in a forest network of different succession stages in Northern Finland. Our study sites represented four forest age classes from young (4 to 30 years) to mature (over 100 years) forests. We show that PUUV-infected bank voles occurred commonly in all forest age…

0106 biological sciencesViral DiseasesEpidemiologyPopulation Dynamicslcsh:MedicineWoodlandWildlife01 natural sciencesPopulation densityPuumala virusTreesZoonoseslcsh:ScienceSmall Animals0303 health sciencesMultidisciplinarybiologyEcologyEcologyArvicolinaeZoonotic DiseasesBank voleMammalogyInfectious DiseasesArvicolinaeVeterinary DiseasesHemorrhagic Fever with Renal SyndromeMedicinePuumala virusTemperate rainforestResearch ArticleHantavirusHantavirus InfectionsAnimal TypeseducationForest management010603 evolutionary biologyMicrobiologyVector BiologyInfectious Disease Epidemiology03 medical and health sciencesVirologyAnimalsDisease DynamicsBiology030304 developmental biologyPopulation Biologylcsh:RfungiHemorrhagic Fevers15. Life on landbiology.organism_classificationEmerging Infectious Diseasesta1181lcsh:QVeterinary Science3111 BiomedicinePopulation EcologyHantavirus InfectionZoologyPloS one
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The Potential Role of Direct and Indirect Contacts on Infection Spread in Dairy Farm Networks.

2017

Animals’ exchanges are considered the most effective route of between-farm infectious disease transmission. However, despite being often overlooked, the infection spread due to contaminated equipment, vehicles, or personnel proved to be important for several livestock epidemics. This study investigated the role of indirect contacts in a potential infection spread in the dairy farm network of the Province of Parma (Northern Italy). We built between-farm contact networks using data on cattle exchange (direct contacts), and on-farm visits by veterinarians (indirect contacts). We compared the features of the contact structures by using measures on static and temporal networks. We assessed the d…

0301 basic medicineMaleEpidemiologyanimal diseasesNetwork structureParatuberculosisAnimal DiseasesDisease Outbreaks0403 veterinary scienceDisease spreadingRisk FactorsParatuberculosisMedicine and Health Scienceslcsh:QH301-705.5MammalsDisease surveillanceEcologyInfectious disease transmissionIncidenceAgriculture04 agricultural and veterinary sciencesRuminantsProfessionsDairyingGeographyInfectious DiseasesComputational Theory and MathematicsVeterinary DiseasesItalyModeling and SimulationVertebratesLivestockFemaleResearch ArticleFarmsLivestock040301 veterinary sciencesContaminated equipmentCattle DiseasesCommunicable DiseasesInfectious Disease EpidemiologyVeterinariansVeterinary Epidemiology03 medical and health sciencesCellular and Molecular NeuroscienceBovinesEnvironmental healthGeneticsmedicineAnimalsComputer SimulationMolecular BiologyEcology Evolution Behavior and SystematicsModels Statisticalbusiness.industryOrganismsBiology and Life Sciencesmedicine.diseaseNorthern italy030104 developmental biologylcsh:Biology (General)AmniotesPeople and PlacesVeterinary ScienceCattlePopulation GroupingsContact TracingbusinessZoologyPLoS Computational Biology
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Mortality and demographic recovery in early post-black death epidemics: Role of recent emigrants in medieval Dijon

2020

International audience; Objective and methodsWe analyze the influence of population movement on susceptibility to death and resilience during two epidemics occurring in Dijon soon after the Black Death. Using a specific program designed to propose links between entries in annual tax registers, we define tentative heads of household, the elapsed time since their first registration and their ties with other persons within the city.ResultsDuring the 1400 epidemic heads of household who were registered for 1–3 years die in large numbers, whereas during years without epidemics, their death rate is lower than that of heads of household who were registered longer. Recent registration is an epidemi…

Bacterial DiseasesMaleTime FactorsEpidemiologyChi Square TestsVulnerability factorDisease OutbreaksGeographical LocationsMathematical and Statistical Techniques0302 clinical medicineMedicine and Health SciencesPublic and Occupational HealthHistory 15th Centurymedia_common[SDV.EE]Life Sciences [q-bio]/Ecology environmentFamily Characteristics0303 health scienceseducation.field_of_studyMultidisciplinaryIncidenceIncidence (epidemiology)Mortality rateStatisticsQRSocioeconomic Aspects of HealthEuropeSurvival RateProfessionsInfectious DiseasesGeographyPhysical SciencesFamineMedicineFemaleFrancePsychological resilienceResearch ArticleDeath Ratesmedia_common.quotation_subjectScience030231 tropical medicinePopulationBlack DeathEmigrants and ImmigrantsResearch and Analysis MethodsInfectious Disease Epidemiology03 medical and health sciencesPopulation MetricsHumansStatistical MethodseducationStatistical Hypothesis TestingSocioeconomic statusDemography030304 developmental biologyPlaguePopulation BiologyBiology and Life SciencesHistory MedievalPlaguesEmigrationHealth CareSocioeconomic FactorsPeople and PlacesPopulation Groupings[SDE.BE]Environmental Sciences/Biodiversity and EcologyMathematicsDemography
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Chagas Disease Vector Control in a Hyperendemic Setting: The First 11 Years of Intervention in Cochabamba, Bolivia

2014

Background Chagas disease has historically been hyperendemic in the Bolivian Department of Cochabamba. In the early 2000s, an extensive vector control program was implemented; 1.34 million dwelling inspections were conducted to ascertain infestation (2000–2001/2003–2011), with blanket insecticide spraying in 2003–2005 and subsequent survey-spraying cycles targeting residual infestation foci. Here, we assess the effects of this program on dwelling infestation rates (DIRs). Methodology/Principal Findings Program records were used to calculate annual, municipality-level aggregate DIRs (39 municipalities); very high values in 2000–2001 (median: 0.77–0.69) dropped to ∼0.03 from 2004 on. A linear…

Chagas diseaseDisease EcologyBolivialcsh:Arctic medicine. Tropical medicineEndemic Diseaseslcsh:RC955-962EpidemiologyEctoparasitic Infestationsmedicine.disease_causeInsect ControlInfectious Disease EpidemiologyOddsInfestationTriatoma infestansparasitic diseasesmedicineMedicine and Health SciencesParasitic DiseasesAnimalsHumansChagas DiseasePublic and Occupational HealthTriatomaEctoparasitic infestationProtozoan InfectionsbiologyEcologylcsh:Public aspects of medicinePublic Health Environmental and Occupational Healthlcsh:RA1-1270Odds ratiomedicine.diseasebiology.organism_classificationTropical DiseasesConfidence intervalInfectious DiseasesTriatomaEpidemiological MonitoringDemographyResearch ArticleNeglected Tropical DiseasesPLoS Neglected Tropical Diseases
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Intracerebral Borna Disease Virus Infection of Bank Voles Leading to Peripheral Spread and Reverse Transcription of Viral RNA

2011

Bornaviruses, which chronically infect many species, can cause severe neurological diseases in some animal species; their association with human neuropsychiatric disorders is, however, debatable. The epidemiology of Borna disease virus (BDV), as for other members of the family Bornaviridae, is largely unknown, although evidence exists for a reservoir in small mammals, for example bank voles (Myodes glareolus). In addition to the current exogenous infections and despite the fact that bornaviruses have an RNA genome, bornavirus sequences integrated into the genomes of several vertebrates millions of years ago. Our hypothesis is that the bank vole, a common wild rodent species in traditional B…

Disease reservoirviruksetEpidemiologyanimal diseasesvirusesVeterinary MicrobiologyUrineVirus ReplicationMOUSE413 Veterinary sciencePolymerase Chain ReactionFecesInfectious Diseases of the Nervous SystemZoonosesBRAINBorna disease virusAntigens Viralbornavirus0303 health sciencesBorna diseaseMultidisciplinarybiologyArvicolinaeZoonotic DiseasesQR3. Good healthBank voleInfectious DiseasesBorna Virus InfectionVeterinary DiseasesArvicolinaeMedical MicrobiologyWILD RODENTSRNA ViralMedicineViral VectorsVeterinary PathologyResearch ArticleEXPRESSIONNeurovirulenceScienceUrinary BladdereducationANTIGENMicrobiologyVector BiologyInfectious Disease EpidemiologyVirusRATSPERSISTENT03 medical and health sciencesVirologyPeripheral Nervous SystemAnimalsHumansViral Nucleic AcidViral sheddingBiologyDisease Reservoirs030304 developmental biology030306 microbiologySTRAINSCENTRAL-NERVOUS-SYSTEMReproducibility of ResultsReverse TranscriptionVeterinary Virologybiology.organism_classificationVirologyViral ReplicationReverse transcriptaseMODELAnimals NewbornViral replicationBorna DiseaseAntibody FormationDNA ViralVeterinary ScienceViral Transmission and InfectionPLoS ONE
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Lymnaea schirazensis, an Overlooked Snail Distorting Fascioliasis Data: Genotype, Phenotype, Ecology, Worldwide Spread, Susceptibility, Applicability

2011

BackgroundLymnaeid snails transmit medical and veterinary important trematodiases, mainly fascioliasis. Vector specificity of fasciolid parasites defines disease distribution and characteristics. Different lymnaeid species appear linked to different transmission and epidemiological patterns. Pronounced susceptibility differences to absolute resistance have been described among lymnaeid populations. When assessing disease characteristics in different endemic areas, unexpected results were obtained in studies on lymnaeid susceptibility to Fasciola. We undertook studies to understand this disease transmission heterogeneity.Methodology/principal findingsA ten-year study in Iran, Egypt, Spain, t…

EpidemiologyInternational CooperationSnailAnimal PhylogeneticsGlobal HealthPolymerase Chain ReactionMalacologyFoodborne DiseasesGlobal Change EcologyComparative AnatomyPhylogenyLymnaeaGalba truncatulaMolecular EpidemiologyMultidisciplinaryEcologyGeographybiologyZoonotic DiseasesEcologyQRMalacologyInfectious DiseasesPhenotypeBiogeographyVeterinary DiseasesMedicinePublic HealthResearch ArticleNeglected Tropical DiseasesDisease EcologyFascioliasisConservation of Natural ResourcesSpecies complexFasciolosisGenotypeScienceZoologyDNA MitochondrialDNA RibosomalInfectious Disease EpidemiologyIntraspecific competitionVeterinary EpidemiologyHepaticaPhylogeneticsbiology.animalparasitic diseasesGeneticsParasitic DiseasesAnimalsBiologyEvolutionary BiologyModels GeneticSelfingSequence Analysis DNAbiology.organism_classificationBiomarker EpidemiologyHaplotypesAnimal TaxonomyBioindicatorsParasitologyVeterinary ScienceZoologyPopulation GeneticsBiomarkersHelminthologyPLoS ONE
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Outside-host growth of pathogens attenuates epidemiological outbreaks.

2012

Opportunist saprotrophic pathogens differ from obligatory pathogens due to their capability in host-independent growth in environmental reservoirs. Thus, the outside-host environment potentially influences host-pathogen dynamics. Despite the socio-economical importance of these pathogens, theory on their dynamics is practically missing. We analyzed a novel epidemiological model that couples outside-host density-dependent growth to host-pathogen dynamics. Parameterization was based on columnaris disease, a major hazard in fresh water fish farms caused by saprotrophic Flavobacterium columnare. Stability analysis and numerical simulations revealed that the outside-host growth maintains high pr…

Fresh water fishEpidemiologySciencePopulation DynamicsFisheriesPopulation ModelingFresh WaterAquacultureFlavobacteriumModels BiologicalMicrobiologyInfectious Disease EpidemiologyDisease Outbreaks03 medical and health sciencesFish DiseasesFlavobacteriaceae InfectionsAnimalsComputer SimulationDisease DynamicsBiology030304 developmental biologyDisease Reservoirs0303 health sciencesMultidisciplinarybiologyPopulation Biology030306 microbiologyEcologyHost (biology)QColumnaris diseaseRFishesOutbreakComputational BiologyAgriculturebiology.organism_classificationHost-Pathogen InteractionInfectious DiseasesFlavobacterium columnareHost-Pathogen InteractionsMedicineFish FarmingInfectious Disease ModelingResearch ArticlePloS one
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Transmission Heterogeneity and Control Strategies for Infectious Disease Emergence

2007

Background The control of emergence and spread of infectious diseases depends critically on the details of the genetic makeup of pathogens and hosts, their immunological, behavioral and ecological traits, and the pattern of temporal and spatial contacts among the age/stage-classes of susceptible and infectious host individuals. Methods and Findings We show that failing to acknowledge the existence of heterogeneities in the transmission rate among age/stage-classes can make traditional eradication and control strategies ineffective, and in some cases, policies aimed at controlling pathogen emergence can even increase disease incidence in the host. When control strategies target for reduction…

Infectious Diseases/Epidemiology and Control of Infectious DiseasesVeterinary medicineDisease reservoirSwinePopulation DynamicsPopulationlcsh:MedicineAnimals WildCullingDiseaseWildlife diseaseBiologyCommunicable DiseasesClassical Swine FeverZoonosesInfectious Diseases/Viral InfectionsAnimalsHumansChildlcsh:ScienceeducationDisease Reservoirseducation.field_of_studyMultidisciplinaryEcologyDisease Eradicationlcsh:RModels TheoreticalInfectious Disease EpidemiologyInfectious DiseasesEcology/Population EcologyEcology/Theoretical EcologyInfectious disease (medical specialty)Population Surveillancelcsh:QDisease SusceptibilityResearch ArticleDemographyPLoS ONE
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Patterns of transmitted HIV drug resistance in Europe vary by risk group

2014

BACKGROUND: In Europe, a continuous programme (SPREAD) has been in place for ten years to study transmission of drug resistant HIV. We analysed time trends of transmitted drug resistance mutations (TDRM) in relation to the risk behaviour reported. METHODS: HIV-1 patients newly diagnosed in 27 countries from 2002 through 2007 were included. Inclusion was representative for risk group and geographical distribution in the participating countries in Europe. Trends over time were calculated by logistic regression. RESULTS: From the 4317 patients included, the majority was men-having-sex-with-men -MSM (2084, 48%), followed by heterosexuals (1501, 35%) and injection drug users (IDU) (355, 8%). MSM…

MaleEpidemiologygenotypeHuman immunodeficiency virus 1HIV InfectionsRNA directed DNA polymerase inhibitorhigh risk patientLogistic regressionSettore MED/42 - Igiene Generale E ApplicataMen who have sex with men0302 clinical medicineImmunodeficiency Virusesmiddle agedstatistics and numerical data10. No inequalitySubstance Abuse Intravenous0303 health sciencesadulttransmissionvirus diseasesvirus transmissionhighly active antiretroviral therapyHIV immunopathogenesis3. Good healthMedical MicrobiologyViral Pathogenshigh risk behaviorMedicineScience & Technology - Other TopicsPOPULATIONShealth programanti human immunodeficiency virus agentUSERSmedicine.medical_specialtyScienceSexual BehaviorImmunologySexually Transmitted Diseasesintravenous drug abuse-Microbiology03 medical and health sciencesAntibiotic resistanceSDG 3 - Good Health and Well-beingHuman immunodeficiency virus infectionproteinase inhibitorHumansProtease InhibitorshumanHeterosexualityMicrobial PathogensseroconversionMedicine and health sciencesScience & TechnologyGenitourinary InfectionsMUTATIONSVirologymajor clinical studyLogistic Modelstransmitted drug resistance mutationHeterosexualityHIV-1Viral Diseases:Medical sciences: 700::Basic medical dental and veterinary sciences: 710::Medical immunology: 716 [VDP]drug responsemen who have sex with menDrug resistanceClinical immunologygeographyAPPEARANCEmale homosexualityMedizinische Fakultätimmune system diseasesEpidemiologyINFECTIONMedicine and Health Sciencessubstance abuse030212 general & internal medicineriskMultidisciplinaryACTIVE ANTIRETROVIRAL THERAPYTransmission (medicine)virus mutationQRarticleObstetrics and GynecologyHIV diagnosis and managementMiddle AgedvirologyMultidisciplinary SciencesEuropeInfectious Diseasesfemale:Medisinske fag: 700::Basale medisinske odontologiske og veterinærmedisinske fag: 710::Medisinsk immunologi: 716 [VDP]Reverse Transcriptase InhibitorsHIV clinical manifestationsFemaleepidemiologyblood samplingHIV drug resistanceResearch ArticleAdultRiskrisk-groupAnti-HIV AgentsUrologyprevalenceInfectious Disease Epidemiologysexual behaviorRisk-Takingmaleantiviral resistanceInternal medicineDrug Resistance Viralmedicinecontrolled studyddc:610Homosexuality Male030304 developmental biologydrug resistanceBiology and life sciencesbusiness.industrystatistical modelHIVCD4 lymphocyte countheterosexualitynonnucleoside reverse transcriptase inhibitorHuman immunodeficiency virus 1 infectionDiagnostic medicineINDIVIDUALSdrug effectsWomen's Healthbusinesstrend study
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Methicillin-resistant Staphylococcus aureus colonization: a three-year prospective study in a neonatal intensive care unit in Italy.

2014

Background: Methicillin resistant Staphylococcus aureus (MRSA) is a major etiological agent of infection in neonatal intensive care units (NICUs). Routes of entry of this organism can be different and the transmission pathway complex. Colonized neonates are the main endogenous reservoir. Methods and Results: We conducted a prospective three-year study on MRSA colonization recruiting 722 neonates admitted between 2009 and 2012. Nasal swabs were cultured weekly and MRSA isolates were submitted to molecular typing. The annual incidence density of acquisition of MRSA ranged from a maximum of 20.2 cases for 1000 patient-days during the first year to a minimum of 8.8 cases in the second one to ra…

MaleMethicillin-Resistant Staphylococcus aureusSettore MED/07 - Microbiologia E Microbiologia ClinicaPediatricsmedicine.medical_specialtyMeticillinNeonatal intensive care unitInfectious Disease ControlClinical Research DesignEpidemiologyBacterial diseasesPrevalenceColony Count Microbiallcsh:MedicineDrug resistanceSettore MED/42 - Igiene Generale E Applicatamedicine.disease_causePediatricsInfectious Disease EpidemiologySettore MED/01 - Statistica MedicaSettore MED/38 - Pediatria Generale E SpecialisticaIntensive careIntensive Care Units NeonatalNosocomial infectionsmedicineHumansColonizationProspective Studieslcsh:ScienceMolecular EpidemiologyMultidisciplinarybusiness.industrylcsh:RInfant NewbornOutbreakStaphylococcal Infectionsbacterial infections and mycosesMethicillin-resistant Staphylococcus aureusMolecular TypingMethicillin resistant Staphylococcus aureus neonatal intensive care unitMedicineInfectious diseasesFemalelcsh:QNeonatologybusinessmedicine.drugResearch ArticlePLoS ONE
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